Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917162.1_cds_XP_016466805.1_59621
CDS Infomation

[gene=LOC107789494] [db_xref=GeneID:107789494] [protein=uncharacterized protein LOC107789494 isoform X2] [protein_id=XP_016466805.1] [location=join(11536..11579,13147..13567,13762..13853,14112..14270,14420..14756,15223..15341,15441..15513,15578..15798,15880..15936,16020..16182,16402..16516,16597..16613)] [gbkey=CDS]
Sequence

ATGGCTTCCCTTTTTTCTCTCCGAACTTCCAGTTTCCATAATCAAGAAATTGTCCGATCA
TGGAACTTAGAAAAATCTGGGTGTAGGAAACTATGTGCATCAAATATATATGTGAAAGAC
CACGGTTTAGGCTGTCTAAAATACATCATTCTGCAAGGATATCTTTCTGCATCATTGTCC
CAGAAGATTTCAAGGAAATGCATCCCTTCAGAAGCTCTAGGATCAGTGGCAGCTGCAGGC
AACCCTGATCAAAACATTATTGAAATGGATCCTTCCTTAGCTAGTTGTAACAGGAATGAG
CTGGAATTCAGTCGAGTCAATTGTCTTGTGTGGGTACTGCATGAATCTGCGAGAAGCTTT
TCAGTTTCAGTGCAGACCCTTGAATTGGCTAAAAATGGGCCTGAGCTTGCAATGGCATGG
GTTGGGGTGGATGTGCATGCGTGGCATAAAAGCATCGCGTATCAGGTAGCAATTTATGCT
TTGCTCAAAGCAGCAATAGAAGTGGAAGTGTTTCTTTCTCGCAAACGCAGCAACAATGCT
TCTTCTGTTCATGAAATCCTATCCCCAATCACCGACTTACTGGGGGAGCGCATCGAAAGT
CAGTTGAATGTAAGGAATCCAAAGTTGGTGCAGTGGTTTAGAACACTGGAGCTGCCACGG
ATAGCGGGAATGTTCATTCCCCTTTTCAAGAAATGGTCTGTGGATTACGCAGGAAGTGGT
GTTGCAGGAAATATCTTGGCCATAAGTTGTTGCACCGCAGTAAGGAAGTTAGGCTCAGGG
CGAGTTTCTTGTCCTTTGTTTTCTGCTTCGATTGAAGATGCACTAGTAGAGCTCATGAAC
TTGTCACATAGACTTGTTTCGGTTGATAAGTTGCACTATTTAGCAACTGAGGCTGGATTT
GAAGAAGACTTCTTGTTTCATTTTGGTAGAAAGGTTCTACCAAGTAACAGTATTGAAGAT
GTAGAATTTTGGATAGGATTGGTTCAAAGAAAACTCAGTAATGCATTCCACAGAGAAAAT
GTGATTACAGACAAGCATACTTTTCACGAGAAGGTTCAGGAAAATAGTTTGGCTACCCTG
GGGCTTTTTGCATATTTGGGAAGAGAGACAAGATTGTTCCTCTCAGAAATGGGTGTAAAG
GATCTTGATGAGCAAACTAAAGATTTTCTGAGTTACTTAGAATGCGGTAGCCTTCTTATG
TATCCTGAATTCTCCACTCTGTCTGAGTATCAGCTCTTCATGGAGGTAGTAGCGAATGAA
ATTGGATGGCTCGACTTTTATGCTGCATCTGCTACCAAATTTTGTGACAAAAGAAGATCC
AAACAACATCCAATTCAAGCAGAGAAAGAAATAATCTTGTACACTGTTTTAACTGTATGC
TATGATATTATAGCTGGATTTGCTCACTATAGCAACTCTGCGCAGCAGCCATTAGATGCA
GATTTACTGGACTTCTTGCTTCAGAGTCAGAGTCTGCTTTCTGGATGCCTGGAGGACTAC
TGGGCAGCTTATGATAGAACAGGAGAACTGCAAAAAAAAGCTGAAAGAAGTGCATCTGAT
CCAGCAGCATCTTTGATTATTAAAGGTGGCATGAGTTCATCCATCATATTGGAAGCGAAG
GAGAAGCCAACTGAGTTGATAAAAACGGAAAATCATCCATATGGATCTAGATTGAATCAG
ATACAGGCCACCAGCTCCGGTGTGATGGACCCTTTGACGTTGGTGGAGTTGGATTGCTCT
ACTGCACCAAAAACACGTCAAAATTTTCTAACAAAATCTACGACCAAGCTGATATCTGCA
AGATATCTGGATGGGTAG

Peptide Sequence

PEP ID

XP_016466805.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107789494 isoform X2 [Nicotiana tabacum]
Sequence

MASLFSLRTSSFHNQEIVRSWNLEKSGCRKLCASNIYVKDHGLGCLKYIILQGYLSASLS
QKISRKCIPSEALGSVAAAGNPDQNIIEMDPSLASCNRNELEFSRVNCLVWVLHESARSF
SVSVQTLELAKNGPELAMAWVGVDVHAWHKSIAYQVAIYALLKAAIEVEVFLSRKRSNNA
SSVHEILSPITDLLGERIESQLNVRNPKLVQWFRTLELPRIAGMFIPLFKKWSVDYAGSG
VAGNILAISCCTAVRKLGSGRVSCPLFSASIEDALVELMNLSHRLVSVDKLHYLATEAGF
EEDFLFHFGRKVLPSNSIEDVEFWIGLVQRKLSNAFHRENVITDKHTFHEKVQENSLATL
GLFAYLGRETRLFLSEMGVKDLDEQTKDFLSYLECGSLLMYPEFSTLSEYQLFMEVVANE
IGWLDFYAASATKFCDKRRSKQHPIQAEKEIILYTVLTVCYDIIAGFAHYSNSAQQPLDA
DLLDFLLQSQSLLSGCLEDYWAAYDRTGELQKKAERSASDPAASLIIKGGMSSSIILEAK
EKPTELIKTENHPYGSRLNQIQATSSGVMDPLTLVELDCSTAPKTRQNFLTKSTTKLISA
RYLDG

Transcript Sequence

Gene sequence data has not been registered.